Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
Hum Mutat
2019 Dec 01;4012:2393-2413. doi: 10.1002/humu.23895.
Show Gene links
Show Anatomy links
De novo GRIN variants in NMDA receptor M2 channel pore-forming loop are associated with neurological diseases.
Li J, Zhang J, Tang W, Mizu RK, Kusumoto H, XiangWei W, Xu Y, Chen W, Amin JB, Hu C, Kannan V, Keller SR, Wilcox WR, Lemke JR, Myers SJ, Swanger SA, Wollmuth LP, Petrovski S, Traynelis SF, Yuan H.
???displayArticle.abstract???
N-methyl-D-aspartate receptors (NMDARs) mediate slow excitatory postsynaptic transmission in the central nervous system, thereby exerting a critical role in neuronal development and brain function. Rare genetic variants in the GRIN genes encoding NMDAR subunits segregated with neurological disorders. Here, we summarize the clinical presentations for 18 patients harboring 12 de novo missense variants in GRIN1, GRIN2A, and GRIN2B that alter residues in the M2 re-entrant loop, a region that lines the pore and is intolerant to missense variation. These de novo variants were identified in children with a set of neurological and neuropsychiatric conditions. Evaluation of the receptor cell surface expression, pharmacological properties, and biophysical characteristics show that these variants can have modest changes in agonist potency, proton inhibition, and surface expression. However, voltage-dependent magnesium inhibition is significantly reduced in all variants. The NMDARs hosting a single copy of a mutant subunit showed a dominant reduction in magnesium inhibition for some variants. These variant NMDARs also show reduced calcium permeability and single-channel conductance, as well as altered open probability. The data suggest that M2 missense variants increase NMDAR charge transfer in addition to varied and complex influences on NMDAR functional properties, which may underlie the patients' phenotypes.
???displayArticle.pubmedLink???
31429998 ???displayArticle.pmcLink???PMC6874887 ???displayArticle.link???Hum Mutat ???displayArticle.grants???[+]
R01 NS036654 NINDS NIH HHS , R01 HD082373 NICHD NIH HHS , R01 NS088479 NINDS NIH HHS , R01 EY016979 NEI NIH HHS , R01HD08237 Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD) of the National Institutes of Health (NIH), R24 NS092989 NINDS NIH HHS , R35 NS111619 NINDS NIH HHS
Akazawa,
Differential expression of five N-methyl-D-aspartate receptor subunit mRNAs in the cerebellum of developing and adult rats.
1994, Pubmed
Akazawa,
Differential expression of five N-methyl-D-aspartate receptor subunit mRNAs in the cerebellum of developing and adult rats.
1994,
Pubmed Allen,
Unexplained early onset epileptic encephalopathy: Exome screening and phenotype expansion.
2016,
Pubmed Amengual-Gual,
Novel drugs and early polypharmacotherapy in status epilepticus.
2019,
Pubmed Beck,
NMDAR channel segments forming the extracellular vestibule inferred from the accessibility of substituted cysteines.
1999,
Pubmed
,
Xenbase Béhé,
Determination of NMDA NR1 subunit copy number in recombinant NMDA receptors.
1995,
Pubmed
,
Xenbase Buck,
NMDA channel gating is influenced by a tryptophan residue in the M2 domain but calcium permeation is not altered.
2000,
Pubmed Burnashev,
Divalent ion permeability of AMPA receptor channels is dominated by the edited form of a single subunit.
1992,
Pubmed Burnashev,
NMDA receptor subunit mutations in neurodevelopmental disorders.
2015,
Pubmed Chen,
High-efficiency transformation of mammalian cells by plasmid DNA.
1987,
Pubmed Chen,
GRIN1 mutation associated with intellectual disability alters NMDA receptor trafficking and function.
2017,
Pubmed Chen,
Behavioral deficits and subregion-specific suppression of LTP in mice expressing a population of mutant NMDA receptors throughout the hippocampus.
2009,
Pubmed Choi,
Excitotoxic cell death.
1992,
Pubmed Colquhoun,
Stochastic properties of ion channel openings and bursts in a membrane patch that contains two channels: evidence concerning the number of channels present when a record containing only single openings is observed.
1990,
Pubmed Dingledine,
The glutamate receptor ion channels.
1999,
Pubmed Endele,
Mutations in GRIN2A and GRIN2B encoding regulatory subunits of NMDA receptors cause variable neurodevelopmental phenotypes.
2010,
Pubmed Farwell,
Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions.
2015,
Pubmed Fedele,
Disease-associated missense mutations in GluN2B subunit alter NMDA receptor ligand binding and ion channel properties.
2018,
Pubmed Hansen,
Distinct functional and pharmacological properties of Triheteromeric GluN1/GluN2A/GluN2B NMDA receptors.
2014,
Pubmed
,
Xenbase Hedegaard,
Molecular pharmacology of human NMDA receptors.
2012,
Pubmed Hickmott,
Experimental down-regulation of the NMDA channel associated with synapse pruning.
1997,
Pubmed Hu,
Human GRIN2B variants in neurodevelopmental disorders.
2016,
Pubmed Jantzie,
Developmental expression of N-methyl-D-aspartate (NMDA) receptor subunits in human white and gray matter: potential mechanism of increased vulnerability in the immature brain.
2015,
Pubmed Jatzke,
Voltage and concentration dependence of Ca(2+) permeability in recombinant glutamate receptor subtypes.
2002,
Pubmed Jones,
The NMDA receptor M3 segment is a conserved transduction element coupling ligand binding to channel opening.
2002,
Pubmed
,
Xenbase Karakas,
Crystal structure of a heterotetrameric NMDA receptor ion channel.
2014,
Pubmed Kashiwagi,
Block and modulation of N-methyl-D-aspartate receptors by polyamines and protons: role of amino acid residues in the transmembrane and pore-forming regions of NR1 and NR2 subunits.
1997,
Pubmed Kuner,
Multiple structural elements determine subunit specificity of Mg2+ block in NMDA receptor channels.
1996,
Pubmed
,
Xenbase Kuner,
A common architecture for K+ channels and ionotropic glutamate receptors?
2003,
Pubmed Kupper,
Probing the pore region of recombinant N-methyl-D-aspartate channels using external and internal magnesium block.
1996,
Pubmed
,
Xenbase Lam,
A novel assay for measurement of membrane-protein surface expression using a β-lactamase.
2013,
Pubmed Law,
Expression of NMDA receptor NR1, NR2A and NR2B subunit mRNAs during development of the human hippocampal formation.
2003,
Pubmed Lee,
NMDA receptor structures reveal subunit arrangement and pore architecture.
2014,
Pubmed
,
Xenbase Lemke,
GRIN2B mutations in West syndrome and intellectual disability with focal epilepsy.
2014,
Pubmed
,
Xenbase Lemke,
Delineating the GRIN1 phenotypic spectrum: A distinct genetic NMDA receptor encephalopathy.
2016,
Pubmed
,
Xenbase Lester,
Channel kinetics determine the time course of NMDA receptor-mediated synaptic currents.
1990,
Pubmed Marwick,
Functional assessment of triheteromeric NMDA receptors containing a human variant associated with epilepsy.
2019,
Pubmed Marwick,
Effect of a GRIN2A de novo mutation associated with epilepsy and intellectual disability on NMDA receptor currents and Mg(2+) block in cultured primary cortical neurons.
2015,
Pubmed
,
Xenbase McTague,
The genetic landscape of the epileptic encephalopathies of infancy and childhood.
2016,
Pubmed Monyer,
Developmental and regional expression in the rat brain and functional properties of four NMDA receptors.
1994,
Pubmed Mullier,
GRIN2B gain of function mutations are sensitive to radiprodil, a negative allosteric modulator of GluN2B-containing NMDA receptors.
2017,
Pubmed
,
Xenbase Ogden,
Molecular Mechanism of Disease-Associated Mutations in the Pre-M1 Helix of NMDA Receptors and Potential Rescue Pharmacology.
2017,
Pubmed
,
Xenbase Paoletti,
NMDA receptor subunit diversity: impact on receptor properties, synaptic plasticity and disease.
2013,
Pubmed Paoletti,
Glycine-independent and subunit-specific potentiation of NMDA responses by extracellular Mg2+.
1995,
Pubmed
,
Xenbase Platzer,
GRIN2B encephalopathy: novel findings on phenotype, variant clustering, functional consequences and treatment aspects.
2017,
Pubmed Premkumar,
Stoichiometry of recombinant N-methyl-D-aspartate receptor channels inferred from single-channel current patterns.
1997,
Pubmed
,
Xenbase Regan,
A structural biology perspective on NMDA receptor pharmacology and function.
2015,
Pubmed Retterer,
Clinical application of whole-exome sequencing across clinical indications.
2016,
Pubmed Sakurada,
Alteration of Ca2+ permeability and sensitivity to Mg2+ and channel blockers by a single amino acid substitution in the N-methyl-D-aspartate receptor.
1993,
Pubmed
,
Xenbase Sharma,
A mutation that alters magnesium block of N-methyl-D-aspartate receptor channels.
1996,
Pubmed Sobolevsky,
X-ray structure, symmetry and mechanism of an AMPA-subtype glutamate receptor.
2009,
Pubmed Soto,
Glutamate receptor mutations in psychiatric and neurodevelopmental disorders.
2014,
Pubmed Strehlow,
GRIN2A-related disorders: genotype and functional consequence predict phenotype.
2019,
Pubmed Swanger,
Mechanistic Insight into NMDA Receptor Dysregulation by Rare Variants in the GluN2A and GluN2B Agonist Binding Domains.
2016,
Pubmed Traynelis,
Glutamate receptor ion channels: structure, regulation, and function.
2010,
Pubmed Traynelis,
Optimizing genomic medicine in epilepsy through a gene-customized approach to missense variant interpretation.
2017,
Pubmed von Stülpnagel,
Epilepsy in patients with GRIN2A alterations: Genetics, neurodevelopment, epileptic phenotype and response to anticonvulsive drugs.
2017,
Pubmed Watanabe,
Distinct distributions of five N-methyl-D-aspartate receptor channel subunit mRNAs in the forebrain.
1993,
Pubmed Williams,
The selectivity filter of the N-methyl-D-aspartate receptor: a tryptophan residue controls block and permeation of Mg2+.
1998,
Pubmed Wollmuth,
Adjacent asparagines in the NR2-subunit of the NMDA receptor channel control the voltage-dependent block by extracellular Mg2+.
1998,
Pubmed
,
Xenbase Wollmuth,
Different mechanisms of Ca2+ transport in NMDA and Ca2+-permeable AMPA glutamate receptor channels.
1998,
Pubmed Wyllie,
Influence of GluN2 subunit identity on NMDA receptor function.
2013,
Pubmed XiangWei,
Heterogeneous clinical and functional features of GRIN2D-related developmental and epileptic encephalopathy.
2019,
Pubmed XiangWei,
De Novo Mutations and Rare Variants Occurring in NMDA Receptors.
2018,
Pubmed Yavarna,
High diagnostic yield of clinical exome sequencing in Middle Eastern patients with Mendelian disorders.
2015,
Pubmed Yi,
Properties of Triheteromeric N-Methyl-d-Aspartate Receptors Containing Two Distinct GluN1 Isoforms.
2018,
Pubmed
,
Xenbase Yuan,
Functional analysis of a de novo GRIN2A missense mutation associated with early-onset epileptic encephalopathy.
2014,
Pubmed Yuan,
Conserved structural and functional control of N-methyl-D-aspartate receptor gating by transmembrane domain M3.
2005,
Pubmed Yuan,
Ionotropic GABA and Glutamate Receptor Mutations and Human Neurologic Diseases.
2015,
Pubmed Zhang,
Essential role of postsynaptic NMDA receptors in developmental refinement of excitatory synapses.
2013,
Pubmed